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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
pCHi-C
3
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
Assay category
3
DNA binding
2
Transcription
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
4
March, 2020
3
December, 2017
2
March, 2023
Available data
4
tsv
3
bam
3
bed bed3+
3
fastq
2
bed narrowPeak
2
bigWig
Organism
7
Homo sapiens
Biosample type
2697
tissue
882
primary cell
641
cell line
258
in vitro differentiated cells
9
stem cell
Organ
1
connective tissue
Project
7
AMP
2
community
Genome assembly (visualization)
3
GRCh38
3
hg19
hg18
Lab
7
AMP-T2D consortium
2
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent control read length
month_released!
May, 2021
assembly!
hg18
BIOSAMPLE
ASSAY
9 results
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pCHi-C
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
stem cell
hESC
3
SB Ad3.1
1
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
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