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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
6
total RNA-seq
4
pCHi-C
2
Hi-C
Assay category
12
DNA accessibility
6
Transcription
2
3D chromatin structure
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
5
bed bed3
5
bigWig
4
bed bed3+
4
bedpe bed3+
4
tsv
3
bed bedgraph
3
txt
2
bam
2
bed narrowPeak
2
hic
2
ibed
Organism
24
Homo sapiens
Biosample type
135
tissue
89
primary cell
24
in vitro differentiated cells
17
cell line
4
stem cell
Organ
13
connective tissue
Project
24
AMP
Genome assembly (visualization)
18
hg19
2
GRCh38
Lab
21
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
12
inconsistent ontology term
month_released!
May, 2023
BIOSAMPLE
ASSAY
24 results
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ATAC-seq
total RNA-seq
pCHi-C
Hi-C
in vitro differentiated cells
chondrocyte
5
cardiomyocytes (cardiac muscle cell)
1
2
1
immature adipocyte
2
2
lymphocyte of B lineage (iPSC)
1
1
1
adipocyte
1
1
embryonic stem cell
1
1
preadipocyte
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
neuron cell of Hypothalamus (neuron)
1
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