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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
316
ChIP-seq
Assay category
316
DNA binding
Target of assay
316
transcription factor
89
recombinant protein
81
control
60
RNA binding protein
26
chromatin remodeller
14
histone
14
histone modification
9
narrow histone mark
5
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
197
November, 2017
57
November, 2018
25
December, 2018
14
January, 2019
11
August, 2021
7
October, 2019
5
February, 2021
November, 2019
Available data
355
bigWig
351
bed narrowPeak
348
bam
337
fastq
328
bigBed narrowPeak
44
bed broadPeak
bigBed broadPeak
5
tagAlign
3
tar
Organism
316
Homo sapiens
Biosample type
316
cell line
94
tissue
49
in vitro differentiated cells
5
primary cell
Organ
253
liver
51
blood
51
bodily fluid
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
Project
316
AMP
Genome assembly (visualization)
307
hg19
276
GRCh38
Lab
305
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
1
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
13
inconsistent control read length
8
inconsistent control run_type
month_released!
November, 2019
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
316 results
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Clear Filters
ChIP-seq
cell line
HepG2
253
GM12878
51
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
iPSC derived cell line
1
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