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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
Assay category
105
DNA binding
13
DNA methylation
1
DNA accessibility
Target of assay
64
histone
64
histone modification
41
control
40
broad histone mark
24
narrow histone mark
Date released
252
August, 2021
189
February, 2023
180
May, 2022
160
February, 2021
119
August, 2017
103
October, 2019
81
May, 2020
72
November, 2017
56
September, 2020
53
May, 2021
47
September, 2023
38
March, 2020
29
October, 2018
25
February, 2020
25
November, 2019
23
July, 2019
23
May, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
13
December, 2017
11
November, 2020
9
October, 2017
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
3
December, 2019
1
August, 2022
1
September, 2018
Available data
233
fastq
228
bam
bigWig
99
bed narrowPeak
89
tsv
71
tagAlign
41
bigBed narrowPeak
40
bed broadPeak
26
bed bed3+
14
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
118
Homo sapiens
Biosample type
106
tissue
in vitro differentiated cells
13
primary cell
Organ
40
adipose tissue
40
connective tissue
36
liver
29
pancreas
13
musculature of body
12
epithelium
Project
119
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
119
AMP-T2D consortium
month_released!
April, 2018
files.file_type!
bigWig
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
119 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
islet of Langerhans
15
skeletal muscle tissue
9
4
adipose tissue
1
1
+ See 2 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
See all biosamples
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