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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
2
ATAC-seq
1
pCHi-C
Assay category
28
DNA binding
2
DNA accessibility
Target of assay
28
control
Date released
18
October, 2018
7
August, 2017
3
June, 2019
1
February, 2021
1
November, 2019
1
November, 2020
Available data
591
bam
bigWig
476
tsv
100
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
31
Homo sapiens
Biosample type
20
tissue
6
in vitro differentiated cells
5
primary cell
Organ
94
liver
88
pancreas
32
blood vessel
32
vasculature
31
connective tissue
30
epithelium
28
heart
25
brain
23
limb
20
adipose tissue
17
artery
13
kidney
11
nerve
8
bone element
8
embryo
8
skeleton
8
spleen
6
blood
6
bodily fluid
5
vein
3
musculature of body
1
eye
Project
31
AMP
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
April, 2018
files.file_type!
bigWig
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
tissue
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
adipocyte
6
primary cell
cardiac fibroblast
2
osteoblast
1
1
mesenchymal stem cell
1
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