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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA binding
1
DNA methylation
Target of assay
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
51
tissue
2
primary cell
Organ
314
pancreas
223
kidney
220
epithelium
169
heart
149
liver
101
bone element
78
vasculature
77
blood vessel
71
connective tissue
56
artery
53
eye
43
brain
36
adipose tissue
30
limb
22
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
7
embryo
4
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
month_released!
April, 2018
files.file_type!
bigWig
target.investigated_as!
histone
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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