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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
144
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
144
Transcription
Target of assay
3
control
Date released
48
July, 2018
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
90
fastq
57
bam
57
bigWig
57
tsv
52
zippedFastqFolder
2
csv
Organism
144
Homo sapiens
Biosample type
174
tissue
144
primary cell
2
in vitro differentiated cells
Organ
41
pancreas
37
epithelium
3
brain
2
connective tissue
Project
85
HPAP
59
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
85
Klaus Kaestner, Upenn
59
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
month_released!
April, 2018
December, 2018
BIOSAMPLE
ASSAY
144 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic acinar cell
6
pancreatic cell
6
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