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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
DNase-seq
33
ATAC-seq
Assay category
486
Transcription
219
DNA binding
78
DNA accessibility
8
DNA methylation
5
3D chromatin structure
Date released
38
June, 2019
11
February, 2021
10
February, 2023
9
October, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
November, 2019
1
October, 2017
Available data
61
bed narrowPeak
58
bam
56
bigWig
49
bigBed narrowPeak
48
bed bed3+
45
bed broadPeak
45
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
78
Homo sapiens
Biosample type
52
tissue
18
in vitro differentiated cells
8
primary cell
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
78
AMP
Genome assembly (visualization)
77
hg19
58
GRCh38
Lab
76
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
inconsistent ontology term
month_released!
April, 2018
BIOSAMPLE
ASSAY
78 results
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DNase-seq
ATAC-seq
tissue
muscle of arm
17
muscle of leg
13
adipose tissue
3
omental fat pad
2
1
tibial artery
2
1
+ See 11 more…
in vitro differentiated cells
adipocyte
1
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
cardiac fibroblast
3
osteoblast
1
2
brain pericyte
1
hepatic stellate cell
1
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