Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
6
ChIP-seq
Assay category
20
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
13
June, 2019
6
October, 2019
4
November, 2017
1
August, 2017
1
November, 2018
1
November, 2020
Available data
776
bam
723
bigWig
544
tsv
208
bed narrowPeak
111
bigBed narrowPeak
106
fastq
40
bed bed3+
28
tagAlign
27
bed broadPeak
26
bigBed broadPeak
6
bed bed3
5
bed bedMethyl
5
bigBed bedMethyl
4
bed bedgraph
3
bedpe bed3+
3
hdf5
3
hic
1
tar
Organism
26
Homo sapiens
Biosample type
18
primary cell
7
tissue
1
in vitro differentiated cells
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
26
AMP
Genome assembly (visualization)
24
GRCh38
24
hg19
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
April, 2018
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
choroid plexus epithelial cell
1
2
brain pericyte
1
+ See 4 more…
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
ascending aorta
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download