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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
Hi-C
1
ATAC-seq
Assay category
7
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
9
October, 2019
1
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
10
Homo sapiens
Biosample type
9
primary cell
1
tissue
Organ
816
pancreas
654
connective tissue
481
adipose tissue
433
liver
415
epithelium
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
10
AMP
Genome assembly (visualization)
4
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
April, 2018
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
Hi-C
ATAC-seq
primary cell
endothelial cell of umbilical vein
7
2
tissue
islet of Langerhans
1
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