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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
623
histone modification
622
histone
363
narrow histone mark
339
control
258
broad histone mark
98
transcription factor
20
RNA binding protein
8
recombinant protein
5
nucleotide modification
2
chromatin remodeller
Date released
6
August, 2017
5
May, 2021
5
May, 2024
2
November, 2017
1
April, 2019
1
November, 2019
Available data
105
bigWig
104
bed narrowPeak
103
bam
bigBed narrowPeak
89
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
20
Homo sapiens
Biosample type
9
in vitro differentiated cells
8
tissue
3
cell line
Organ
5
heart
4
connective tissue
3
pancreas
2
liver
1
epithelium
1
kidney
Project
20
AMP
Genome assembly (visualization)
12
GRCh38
7
hg19
Lab
10
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
month_released!
April, 2018
lab.title!
Bing Ren, UCSD
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
cell line
HepG2
2
EndoC_BH1
1
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