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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
178
histone
178
histone modification
91
broad histone mark
87
narrow histone mark
29
control
17
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
60
August, 2017
May, 2021
20
May, 2024
5
October, 2017
4
November, 2017
2
August, 2021
Available data
363
bigWig
356
bed narrowPeak
bam
242
bigBed narrowPeak
118
fastq
103
tagAlign
36
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
91
Homo sapiens
Biosample type
81
tissue
9
in vitro differentiated cells
1
cell line
Organ
28
connective tissue
20
adipose tissue
20
heart
13
liver
12
musculature of body
9
brain
8
pancreas
Project
91
AMP
Genome assembly (visualization)
20
GRCh38
13
hg19
Lab
70
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
month_released!
April, 2018
May, 2021
files.file_type!
bam
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
tissue
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
liver
12
skeletal muscle tissue
12
islet of Langerhans
8
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in vitro differentiated cells
adipocyte
8
neural progenitor cell
1
cell line
HepG2
1
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