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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
163
DNA accessibility
125
Transcription
29
DNA binding
4
DNA methylation
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
9
transcription factor
8
control
7
narrow histone mark
7
recombinant protein
5
broad histone mark
2
RNA binding protein
Date released
April, 2019
21
October, 2019
5
May, 2019
3
June, 2019
Available data
29
bam
21
bed narrowPeak
21
bigWig
6
bigBed narrowPeak
Organism
29
Homo sapiens
Biosample type
15
primary cell
10
cell line
4
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
39
musculature of body
37
heart
35
nerve
34
artery
29
kidney
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
29
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
29
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
month_released!
April, 2019
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
tissue
kidney
4
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