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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
21
ChIP-seq
5
total RNA-seq
1
snATAC-seq
Assay category
39
DNA accessibility
21
DNA binding
5
Transcription
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
3
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
59
bed narrowPeak
46
bigWig
44
bam
44
fastq
21
bigBed narrowPeak
5
tsv
1
bed bed3+
1
txt
Organism
65
Homo sapiens
Biosample type
45
tissue
20
cell line
Organ
25
liver
18
pancreas
15
blood
15
bodily fluid
6
spleen
1
musculature of body
Project
65
AMP
Genome assembly (visualization)
65
hg19
26
GRCh38
Lab
27
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
1
audit script error
month_released!
April, 2019
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
snATAC-seq
tissue
liver
20
islet of Langerhans
18
spleen
6
skeletal muscle tissue
1
cell line
GM12878
15
HepG2
5
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