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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
475
ChIP-seq
Assay category
475
DNA binding
Target of assay
282
transcription factor
103
histone
103
histone modification
87
control
66
recombinant protein
58
broad histone mark
45
narrow histone mark
37
RNA binding protein
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
461
bam
393
fastq
384
bigWig
365
bed narrowPeak
344
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
15
bed bed3+
3
tar
Organism
475
Homo sapiens
Biosample type
315
cell line
130
tissue
24
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
378
liver
91
brain
epithelium
13
embryo
6
vasculature
3
blood vessel
Project
475
AMP
Genome assembly (visualization)
337
GRCh38
336
hg19
Lab
475
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
11
missing controlled_by
Audit category:
31
inconsistent control read length
4
inconsistent control run_type
month_released!
April, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
475 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
liver
38
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 3 more…
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
primary cell
astrocyte of the cerebellum
3
stem cell
hESC
3
See all biosamples
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