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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
51
Transcription
41
DNA methylation
Date released
134
May, 2022
18
September, 2020
Available data
2871
bam
2679
bigWig
1739
bed narrowPeak
fastq
1199
tsv
968
bigBed narrowPeak
390
tagAlign
319
bed broadPeak
283
bigBed broadPeak
267
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
primary cell
Organ
80
epithelium
80
pancreas
Project
152
HPAP
Lab
152
Klaus Kaestner, Upenn
month_released!
April, 2019
organ_slims!
adipose tissue
files.file_type!
fastq
BIOSAMPLE
ASSAY
152 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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