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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
8
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
histone modification
1
narrow histone mark
Date released
8
January, 2021
3
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
8
bam
8
fastq
3
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
9
cell line
8
primary cell
Organ
776
pancreas
566
connective tissue
442
adipose tissue
422
epithelium
350
liver
310
kidney
269
heart
159
bone element
156
vasculature
152
blood vessel
116
artery
96
brain
73
limb
63
musculature of body
57
eye
22
embryo
20
lung
19
nerve
18
ureter
17
blood
17
bodily fluid
16
skeleton
13
spleen
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
9
AMP
8
T1D
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
9
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
April, 2019
target.investigated_as!
transcription factor
histone modification
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
8
1
primary cell
peripheral blood mononuclear cell
8
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