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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
total RNA-seq
57
ATAC-seq
41
WGBS
37
single cell RNA-seq
Assay category
163
Transcription
57
DNA accessibility
41
DNA methylation
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
177
bam
153
bigWig
153
tsv
80
zippedFastqFolder
63
fastq
18
bed narrowPeak
6
txt
Organism
261
Homo sapiens
Biosample type
144
tissue
117
primary cell
Organ
261
pancreas
113
epithelium
40
liver
2
connective tissue
2
musculature of body
Project
181
AMP
80
HPAP
Genome assembly (visualization)
171
hg19
153
GRCh38
Lab
157
AMP-T2D consortium
80
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
month_released!
April, 2019
BIOSAMPLE
ASSAY
261 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
tissue
islet of Langerhans
126
18
primary cell
pancreatic alpha cell
22
25
7
pancreatic beta cell
13
16
9
pancreatic acinar cell
4
5
pancreatic delta cell
4
pancreatic ductal cell
3
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