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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
14
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
41
DNA accessibility
14
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
12
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
48
bed narrowPeak
20
bam
13
bigWig
11
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
59
Homo sapiens
Biosample type
66
cell line
59
tissue
2
primary cell
Organ
527
connective tissue
468
adipose tissue
464
pancreas
336
liver
276
kidney
226
heart
195
brain
158
bone element
97
blood vessel
97
vasculature
88
limb
66
musculature of body
59
artery
56
eye
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
59
AMP
Genome assembly (visualization)
48
GRCh38
13
hg19
Lab
59
AMP-T2D consortium
month_released!
April, 2019
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
59 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
2
1
tibial artery
1
9
2
1
pulmonary artery
2
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