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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
Assay category
15
Transcription
4
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
February, 2023
21
October, 2019
3
June, 2019
1
February, 2020
Available data
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
1
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
primary cell
Organ
777
liver
631
connective tissue
581
pancreas
488
adipose tissue
344
heart
318
kidney
264
brain
164
blood vessel
164
vasculature
150
bone element
122
limb
104
artery
103
epithelium
82
musculature of body
61
blood
61
bodily fluid
43
nerve
37
embryo
25
eye
25
spleen
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
25
AMP-T2D consortium
month_released!
April, 2020
February, 2023
biosample_type!
primary cell
assay_title!
MPRA
BIOSAMPLE
ASSAY
25 results
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total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
14
4
2
1
retina
1
3
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