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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
23
DNase-seq
Assay category
40
DNA binding
23
DNA accessibility
Target of assay
52
histone
52
histone modification
36
broad histone mark
narrow histone mark
4
transcription factor
3
recombinant protein
1
RNA binding protein
Date released
38
November, 2017
23
June, 2019
2
November, 2018
Available data
376
bam
349
fastq
198
tsv
188
bed narrowPeak
157
txt
153
zippedFastqFolder
128
tagAlign
122
bigWig
64
xls
63
bigBed narrowPeak
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
63
Homo sapiens
Biosample type
52
tissue
7
primary cell
4
cell line
Organ
46
brain
7
kidney
6
epithelium
4
liver
3
heart
2
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
63
AMP
Genome assembly (visualization)
850
GRCh38
hg19
Lab
63
AMP-T2D consortium
month_released!
April, 2020
target.investigated_as!
narrow histone mark
assembly!
hg19
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
DNase-seq
tissue
layer of hippocampus
10
caudate nucleus
8
1
substantia nigra
8
middle frontal area 46
6
cingulate gyrus
4
+ See 13 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
cell line
HepG2
4
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