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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
WGBS
4
RRBS
3
Hi-C
Assay category
13
DNA methylation
3
3D chromatin structure
Date released
July, 2019
7
November, 2018
6
August, 2017
3
October, 2022
Available data
3310
bam
3084
bigWig
1810
bed narrowPeak
1535
tsv
1358
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
16
Homo sapiens
Biosample type
11
tissue
4
primary cell
1
cell line
Organ
7
pancreas
3
epithelium
2
adipose tissue
2
connective tissue
2
liver
2
musculature of body
2
spleen
Project
13
AMP
3
HPAP
Genome assembly (visualization)
9
GRCh38
7
hg19
Lab
13
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
month_released!
April, 2020
July, 2019
BIOSAMPLE
ASSAY
16 results
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WGBS
RRBS
Hi-C
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 1 more…
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
skeletal muscle myoblast
1
cell line
HepG2
1
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