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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
62
DNA binding
2
DNA accessibility
Target of assay
34
transcription factor
27
histone
27
histone modification
14
narrow histone mark
12
broad histone mark
4
RNA binding protein
2
chromatin remodeller
1
control
Date released
455
February, 2021
64
August, 2017
18
July, 2019
14
June, 2019
10
February, 2023
6
November, 2020
5
October, 2018
4
August, 2021
3
October, 2019
2
April, 2018
2
July, 2018
1
January, 2018
1
May, 2021
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
63
bam
63
bigWig
63
fastq
46
bed narrowPeak
11
bed bed3+
3
bigBed narrowPeak
2
bed broadPeak
1
bigBed broadPeak
1
tagAlign
Organism
64
Homo sapiens
Biosample type
49
in vitro differentiated cells
15
tissue
Organ
159
pancreas
64
connective tissue
20
liver
17
epithelium
15
adipose tissue
15
musculature of body
Project
64
AMP
Genome assembly (visualization)
65
GRCh38
64
hg19
Lab
64
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
April, 2020
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
48
1
tissue
white adipose tissue
12
adipose tissue
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
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