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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
54
transcription factor
13
control
13
histone
13
histone modification
10
RNA binding protein
10
chromatin remodeller
9
narrow histone mark
4
broad histone mark
Date released
5
December, 2017
3
February, 2018
1
January, 2019
Available data
9
bam
9
fastq
8
bed narrowPeak
8
bigWig
1
bed bed3+
1
bigBed narrowPeak
Organism
9
Homo sapiens
Biosample type
8
in vitro differentiated cells
1
cell line
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
9
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
April, 2020
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
cell line
GM12878
1
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