Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
23
ChIP-seq
5
ATAC-seq
3
small RNA-seq
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
401
Transcription
23
DNA binding
5
DNA accessibility
Target of assay
18
control
5
RNA binding protein
5
transcription factor
Date released
386
February, 2021
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
November, 2019
1
October, 2017
1
October, 2019
Available data
423
bam
406
bigWig
401
tsv
25
fastq
8
bed narrowPeak
6
bigBed narrowPeak
1
bedpe bed3+
Organism
431
Homo sapiens
Biosample type
429
tissue
2
primary cell
1
in vitro differentiated cells
Organ
730
liver
700
pancreas
551
connective tissue
432
adipose tissue
429
epithelium
355
heart
273
kidney
254
brain
223
vasculature
219
blood vessel
159
bone element
137
artery
85
limb
69
blood
69
bodily fluid
57
eye
41
nerve
37
embryo
36
musculature of body
22
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
432
AMP
Genome assembly (visualization)
409
hg19
406
GRCh38
Lab
432
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
August, 2017
assay_title!
DNase-seq
WGBS
BIOSAMPLE
ASSAY
432 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
small RNA-seq
pCHi-C
RNA microarray
tissue
adipose tissue
382
3
1
subcutaneous adipose tissue
7
12
1
1
omental fat pad
5
11
1
1
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
Download