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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
WGBS
13
RRBS
1
DNAme array
Assay category
1663
Transcription
1441
DNA binding
744
DNA accessibility
72
DNA methylation
31
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
17
July, 2019
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
22
bed bedMethyl
22
bigBed bedMethyl
13
fastq
10
bam
9
bigWig
6
tsv
Organism
72
Homo sapiens
Biosample type
56
primary cell
15
tissue
1
cell line
Organ
53
epithelium
53
pancreas
heart
4
kidney
3
liver
3
vasculature
2
blood vessel
2
brain
2
musculature of body
2
spleen
1
connective tissue
1
eye
1
limb
1
pericardium
Project
47
HPAP
25
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
47
Klaus Kaestner, Upenn
25
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
August, 2017
assay_title!
pCHi-C
organ_slims!
heart
BIOSAMPLE
ASSAY
72 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
pancreas
2
1
aorta
2
body of pancreas
2
spleen
2
brain
1
+ See 5 more…
cell line
HepG2
1
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