Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1460
ChIP-seq
1444
total RNA-seq
524
ATAC-seq
363
single cell RNA-seq
87
RNA microarray
84
snATAC-seq
66
WGBS
57
pCHi-C
34
Hi-C
18
small RNA-seq
15
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
3
DNA accessibility
Date released
August, 2017
3
October, 2019
Available data
205
bam
205
bed narrowPeak
205
bigBed narrowPeak
205
bigWig
204
bed bed3+
bed broadPeak
204
bigBed broadPeak
9
fastq
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Organ
3
epithelium
3
kidney
Project
3
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
3
AMP-T2D consortium
month_released!
August, 2017
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
3 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
Download