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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1397
ChIP-seq
1199
total RNA-seq
205
DNase-seq
170
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
16
WGBS
4
FAIRE-seq
1
pCHi-C
Assay category
205
DNA accessibility
Date released
187
June, 2019
9
November, 2018
8
October, 2019
August, 2017
1
November, 2020
Available data
205
bam
205
bed narrowPeak
205
bigBed narrowPeak
205
bigWig
204
bed bed3+
204
bed broadPeak
204
bigBed broadPeak
9
fastq
Organism
205
Homo sapiens
Biosample type
176
tissue
27
primary cell
2
cell line
Organ
79
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
205
AMP
Genome assembly (visualization)
205
GRCh38
182
hg19
Lab
205
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
205 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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