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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2455
bam
2293
bigWig
1328
tsv
1252
bed narrowPeak
648
bigBed narrowPeak
607
fastq
247
tagAlign
229
bed bed3+
218
bed broadPeak
207
bigBed broadPeak
155
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
18
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
4
hdf5
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
month_released!
August, 2017
audit.ERROR.category!
audit script error
organ_slims!
liver
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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