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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
2
November, 2019
1
March, 2019
1
March, 2020
Available data
521
bam
464
bigWig
328
tsv
303
fastq
165
bed narrowPeak
80
zippedFastqFolder
74
bigBed narrowPeak
10
bed bed3+
9
bed broadPeak
7
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
4
bedpe bed3+
4
hic
3
tagAlign
1
bedpe
1
hdf5
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Organ
4
pancreas
3
heart
2
blood vessel
2
epithelium
2
liver
2
musculature of body
2
vasculature
1
kidney
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
audit script error
1
inconsistent ontology term
month_released!
August, 2017
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
4 results
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Hi-C
tissue
islet of Langerhans
2
pancreas
1
cell line
EndoC_BH1
1
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