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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
21
histone
21
histone modification
19
transcription factor
12
broad histone mark
11
chromatin remodeller
9
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
August, 2017
5
November, 2017
2
December, 2017
1
February, 2018
1
October, 2018
Available data
9
bam
9
bigWig
9
fastq
8
bed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
tagAlign
1
bed bed3+
Organism
9
Homo sapiens
Biosample type
5
cell line
2
in vitro differentiated cells
1
stem cell
1
tissue
Organ
5
liver
1
embryo
1
epithelium
1
pancreas
Project
9
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
9
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
cell line
HepG2
5
in vitro differentiated cells
Hepatic endoderm
1
definitive endodermal cell
1
stem cell
hESC
1
tissue
body of pancreas
1
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