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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
21
histone
21
histone modification
19
transcription factor
12
broad histone mark
11
chromatin remodeller
9
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
10
November, 2017
August, 2017
5
November, 2018
4
December, 2017
Available data
19
bam
19
bed narrowPeak
19
bigWig
19
fastq
15
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
15
cell line
4
in vitro differentiated cells
Organ
15
liver
1
embryo
Project
19
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
19
inconsistent control read length
8
inconsistent control run_type
month_released!
August, 2017
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
cell line
HepG2
15
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
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