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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
233
ChIP-seq
Assay category
233
DNA binding
Target of assay
233
histone
233
histone modification
137
narrow histone mark
96
broad histone mark
49
control
5
transcription factor
Date released
84
May, 2021
67
November, 2017
August, 2017
40
October, 2019
27
May, 2020
12
October, 2017
3
August, 2021
Available data
693
bigWig
690
bed narrowPeak
628
bam
349
bigBed narrowPeak
233
tagAlign
87
fastq
28
bed broadPeak
19
bigBed broadPeak
5
bed bed3+
1
tagAlign bed3+
Organism
233
Homo sapiens
Biosample type
135
tissue
87
primary cell
in vitro differentiated cells
11
cell line
Organ
99
brain
41
liver
3
epithelium
1
pituitary gland
Project
149
AMP
84
T1D
Genome assembly (visualization)
206
GRCh38
177
hg19
Lab
149
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
August, 2017
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
233 results
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ChIP-seq
tissue
liver
27
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
brain
12
+ See 39 more…
primary cell
monocyte
84
hepatocyte
3
cell line
HepG2
11
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