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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
27
histone
27
histone modification
14
narrow histone mark
13
broad histone mark
9
control
4
transcription factor
3
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
7
December, 2017
4
November, 2019
2
May, 2021
1
March, 2020
Available data
14
bam
14
bed narrowPeak
14
bigWig
7
fastq
5
bigBed narrowPeak
1
tagAlign
Organism
14
Homo sapiens
Biosample type
primary cell
8
in vitro differentiated cells
6
cell line
Organ
114
brain
45
liver
38
heart
24
pancreas
18
blood vessel
18
vasculature
15
limb
14
epithelium
10
kidney
8
embryo
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
musculature of body
2
spleen
1
blood
1
bodily fluid
1
connective tissue
1
lymph node
1
pituitary gland
Project
12
AMP
2
T1D
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
August, 2017
biosample_type!
primary cell
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
6
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