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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
15
WGBS
12
ATAC-seq
Assay category
30
DNA methylation
12
DNA accessibility
Date released
23
July, 2019
10
February, 2023
7
November, 2018
August, 2017
2
February, 2021
Available data
3110
bam
2857
bigWig
1635
bed narrowPeak
1511
tsv
1071
fastq
1000
bigBed narrowPeak
313
tagAlign
281
bed broadPeak
270
bigBed broadPeak
240
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
42
Homo sapiens
Biosample type
25
tissue
10
primary cell
5
in vitro differentiated cells
2
cell line
Organ
8
heart
7
connective tissue
6
epithelium
6
pancreas
4
bone element
4
kidney
4
skeleton
3
brain
3
liver
2
musculature of body
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
42
AMP
Genome assembly (visualization)
27
hg19
17
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
month_released!
August, 2017
BIOSAMPLE
ASSAY
42 results
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Clear Filters
RRBS
WGBS
ATAC-seq
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
brain
1
1
heart right ventricle
2
+ See 12 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
1
See all biosamples
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