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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
53
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
66
Transcription
Date released
89
February, 2021
57
August, 2021
4
February, 2023
1
October, 2022
Available data
325
bam
225
fastq
189
tsv
177
bed narrowPeak
151
txt
112
tagAlign
95
bigWig
77
bigBed narrowPeak
73
zippedFastqFolder
64
xls
21
bed bed3+
21
bed broadPeak
21
bigBed broadPeak
11
bed bedMethyl
11
bigBed bedMethyl
8
csv
1
bedpe bed3+
1
hic
1
vcf
Organism
150
Homo sapiens
Biosample type
150
tissue
1
cell line
Organ
88
bone element
62
kidney
pancreas
4
skeleton
Project
151
AMP
Genome assembly (visualization)
hg19
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
month_released!
August, 2017
assembly!
hg19
organ_slims!
pancreas
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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