Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
1
snATAC-seq
Assay category
72
Transcription
1
DNA accessibility
Date released
89
February, 2021
57
August, 2021
7
May, 2022
4
February, 2023
1
October, 2022
Available data
2873
bam
2646
bigWig
1546
bed narrowPeak
1380
tsv
984
bigBed narrowPeak
984
fastq
287
tagAlign
281
bed broadPeak
270
bigBed broadPeak
222
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
157
Homo sapiens
Biosample type
157
tissue
in vitro differentiated cells
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
1
musculature of body
Project
158
AMP
Genome assembly (visualization)
1
hg19
Lab
95
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
6
audit script error
month_released!
August, 2017
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
158 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
snATAC-seq
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
+ See 3 more…
cell line
MIN6
1
See all biosamples
Download