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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
54
Homo sapiens
Biosample type
53
tissue
1
primary cell
Organ
237
pancreas
207
kidney
206
epithelium
182
heart
93
bone element
82
liver
54
eye
51
vasculature
50
blood vessel
43
brain
39
artery
37
connective tissue
20
lung
13
musculature of body
9
adipose tissue
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
28
hg19
Lab
54
AMP-T2D consortium
month_released!
August, 2017
December, 2019
files.file_type!
bam
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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