Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
Assay category
12
DNA accessibility
Date released
10
February, 2023
2
February, 2021
Available data
3086
bam
2877
bigWig
1637
bed narrowPeak
1511
tsv
1047
fastq
1000
bigBed narrowPeak
313
tagAlign
281
bed broadPeak
270
bigBed broadPeak
239
bed bed3+
154
txt
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
19
zippedFastqFolder
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
12
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
12
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent replicate
month_released!
August, 2017
May, 2022
assay_title!
whole genome sequencing assay
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
Download