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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
WGBS
13
RRBS
1
Hi-C
Assay category
28
DNA methylation
1
3D chromatin structure
Date released
21
July, 2019
7
November, 2018
August, 2017
1
March, 2019
Available data
2867
bam
2675
bigWig
1485
tsv
1472
bed narrowPeak
1050
fastq
873
bigBed narrowPeak
234
bed broadPeak
232
bigBed broadPeak
205
bed bed3+
195
tagAlign
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
29
Homo sapiens
Biosample type
20
tissue
8
primary cell
1
cell line
Organ
8
heart
7
pancreas
6
epithelium
4
kidney
brain
2
liver
2
musculature of body
2
spleen
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
pericardium
Project
29
AMP
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
28
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
month_released!
August, 2017
organ_slims!
brain
BIOSAMPLE
ASSAY
29 results
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WGBS
RRBS
Hi-C
tissue
heart left ventricle
2
1
pancreas
2
1
body of pancreas
2
heart right ventricle
2
islet of Langerhans
1
1
+ See 7 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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