Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
314
total RNA-seq
74
single cell RNA-seq
2
small RNA-seq
Assay category
390
Transcription
168
DNA accessibility
124
DNA binding
53
DNA methylation
9
3D chromatin structure
Date released
157
July, 2018
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
6
May, 2022
5
March, 2020
4
July, 2019
3
August, 2018
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
323
bam
319
tsv
317
bigWig
164
fastq
6
txt
Organism
390
Homo sapiens
Biosample type
202
tissue
155
primary cell
33
cell line
Organ
481
connective tissue
401
adipose tissue
390
pancreas
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
pericardium
1
spinal cord
Project
328
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
317
GRCh38
317
hg19
Lab
324
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
month_released!
August, 2017
organ_slims!
pericardium
BIOSAMPLE
ASSAY
390 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
195
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 4 more…
cell line
EndoC_BH1
33
See all biosamples
Download