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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
3
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
18
DNA binding
3
DNA accessibility
2
Transcription
Target of assay
18
control
Date released
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
October, 2019
Available data
19
fastq
18
bam
3
tsv
2
bigWig
1
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
25
tissue
1
in vitro differentiated cells
Organ
275
pancreas
225
liver
218
epithelium
149
kidney
127
heart
93
bone element
69
brain
58
connective tissue
55
eye
45
vasculature
43
blood vessel
26
adipose tissue
26
limb
20
lung
17
musculature of body
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
411
hg19
GRCh38
Lab
26
AMP-T2D consortium
month_released!
August, 2017
organ_slims!
pericardium
assembly!
GRCh38
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
3
1
in vitro differentiated cells
white fat cell
1
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