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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
WGBS
14
RRBS
1
DNAme array
Assay category
1762
Transcription
1473
DNA binding
763
DNA accessibility
79
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
24
July, 2019
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
28
bed bedMethyl
28
bigBed bedMethyl
14
bam
14
bigWig
13
fastq
6
tsv
Organism
79
Homo sapiens
Biosample type
56
primary cell
22
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
4
kidney
3
liver
vasculature
2
blood vessel
2
brain
2
musculature of body
2
spleen
1
connective tissue
1
eye
1
limb
1
pericardium
Project
47
HPAP
32
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
47
Klaus Kaestner, Upenn
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
August, 2017
organ_slims!
vasculature
BIOSAMPLE
ASSAY
79 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
pancreas
2
1
body of pancreas
2
heart right ventricle
2
spleen
2
+ See 8 more…
cell line
HepG2
1
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