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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
334
transcription factor
97
control
82
recombinant protein
70
histone
70
histone modification
58
RNA binding protein
47
narrow histone mark
23
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
5
October, 2019
Available data
70
bigWig
68
bed narrowPeak
67
bam
41
tagAlign
32
fastq
30
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
70
Homo sapiens
Biosample type
37
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
85
pancreas
79
epithelium
71
vasculature
70
blood vessel
70
liver
62
heart
49
limb
30
kidney
24
nerve
20
artery
15
vein
14
musculature of body
12
embryo
9
connective tissue
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
70
hg19
57
GRCh38
Lab
67
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
tissue
liver
32
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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