Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
429
ChIP-seq
270
ATAC-seq
263
single cell RNA-seq
248
total RNA-seq
87
RNA microarray
83
snATAC-seq
66
WGBS
53
pCHi-C
25
DNase-seq
10
MeRIP-seq
7
Hi-C
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
25
DNA accessibility
Date released
23
June, 2019
2
October, 2019
August, 2017
Available data
23
bam
23
bed bed3+
23
bed broadPeak
23
bed narrowPeak
23
bigBed broadPeak
23
bigBed narrowPeak
23
bigWig
Organism
25
Homo sapiens
Biosample type
16
tissue
9
primary cell
Organ
10
brain
9
kidney
8
epithelium
3
heart
2
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
25
AMP
Genome assembly (visualization)
205
GRCh38
hg19
Lab
25
AMP-T2D consortium
month_released!
August, 2017
target.investigated_as!
RNA binding protein
assembly!
hg19
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 9 more…
primary cell
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
See all biosamples
Download