Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
23
ChIP-seq
5
ATAC-seq
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
401
Transcription
23
DNA binding
7
DNA accessibility
Target of assay
18
control
5
RNA binding protein
5
transcription factor
Date released
386
February, 2021
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
425
bam
408
bigWig
401
tsv
26
fastq
10
bed narrowPeak
8
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
Organism
433
Homo sapiens
Biosample type
431
tissue
2
primary cell
1
in vitro differentiated cells
Organ
719
pancreas
690
liver
554
connective tissue
454
epithelium
434
adipose tissue
339
kidney
328
heart
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
68
blood
68
bodily fluid
64
musculature of body
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
434
AMP
Genome assembly (visualization)
411
hg19
408
GRCh38
Lab
434
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
August, 2017
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
434 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
small RNA-seq
DNase-seq
pCHi-C
RNA microarray
tissue
adipose tissue
382
3
1
subcutaneous adipose tissue
7
12
1
1
omental fat pad
5
11
1
1
2
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
Download