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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
21
histone
21
histone modification
transcription factor
12
broad histone mark
11
chromatin remodeller
9
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
11
November, 2017
August, 2017
7
December, 2017
2
February, 2018
1
October, 2018
Available data
21
bam
21
bigWig
21
fastq
19
bed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
10
bigBed narrowPeak
6
bed bed3+
Organism
21
Homo sapiens
Biosample type
11
cell line
7
in vitro differentiated cells
2
stem cell
1
tissue
Organ
11
liver
2
embryo
1
epithelium
1
pancreas
Project
21
AMP
Genome assembly (visualization)
21
hg19
19
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
21
inconsistent control read length
1
inconsistent assembly
month_released!
August, 2017
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
cell line
HepG2
11
in vitro differentiated cells
definitive endodermal cell
3
Hepatic endoderm
1
Posterior foregut
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
2
tissue
body of pancreas
1
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