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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
10
November, 2017
6
November, 2019
4
October, 2019
1
August, 2021
Available data
20
bam
20
bigWig
19
bed narrowPeak
12
bigBed narrowPeak
10
fastq
9
bed broadPeak
9
bigBed broadPeak
6
tagAlign
Organism
21
Homo sapiens
Biosample type
233
tissue
106
primary cell
36
in vitro differentiated cells
21
cell line
1
stem cell
Organ
11
liver
10
pancreas
6
epithelium
Project
21
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
20
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
6
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
cell line
HepG2
11
EndoC_BH1
6
Panc1
4
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