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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
184
single cell RNA-seq
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
184
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
125
fastq
97
bam
97
bigWig
97
tsv
52
zippedFastqFolder
2
csv
Organism
184
Homo sapiens
Biosample type
184
primary cell
180
tissue
2
in vitro differentiated cells
Organ
71
pancreas
67
epithelium
4
connective tissue
3
brain
Project
99
AMP
85
HPAP
Genome assembly (visualization)
97
GRCh38
97
hg19
Lab
99
AMP-T2D consortium
85
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
month_released!
August, 2018
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
184 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic beta cell
12
pancreatic acinar cell
11
pancreatic delta cell
11
pancreatic alpha cell
10
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