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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
32
ChIP-seq
23
single cell RNA-seq
17
ATAC-seq
Assay category
65
Transcription
32
DNA binding
17
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
August, 2018
3
June, 2018
1
March, 2019
Available data
114
fastq
75
bigWig
72
bam
46
bed narrowPeak
26
tsv
19
zippedFastqFolder
14
bigBed narrowPeak
1
csv
Organism
114
Homo sapiens
Biosample type
114
primary cell
Organ
91
pancreas
80
epithelium
Project
73
AMP
41
HPAP
Genome assembly (visualization)
75
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
32
missing controlled_by
month_released!
August, 2018
BIOSAMPLE
ASSAY
114 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
primary cell
pancreatic alpha cell
25
5
Langerhans cell
22
pancreatic ductal cell
4
13
4
pancreatic beta cell
11
5
pancreatic acinar cell
2
8
3
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